PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.4G081100.1.p
Organism
Setaria viridis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 326aa    MW: 35254.3 Da    PI: 9.6995
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.4G081100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.15.9e-16245298557
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk.keleelkkeva 57 
                         +r+rr++kNRe+A rsR+RK+a+i eLe +v++L+++N++L+ k++e+lkk+ +
  Sevir.4G081100.1.p 245 RRQRRMIKNRESAARSRARKQAYIMELEAEVAKLKEQNDELQkKQVEMLKKQKD 298
                         79**************************************96156888888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-13241306IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.082243288IPR004827Basic-leucine zipper domain
CDDcd147074.14E-26245299No hitNo description
SuperFamilySSF579594.85E-11245291No hitNo description
PfamPF001703.1E-13245300IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-15245299No hitNo description
PROSITE patternPS000360248263IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MERQGSIYSL TFDEFQSALG GASKDFGSMN MDELLRNIWT AEESNAMAAA APATAAASAH  60
HHHQQQPAAP IQRQGSFTLP RTLSQKTVDE VWREIVGLTG GEDEPPVPPP APAAPPAPLP  120
AQAQAQRQPT LGSMTLEEFL VRAGVVREDM GQQPLVLPPH AQALFSQGNA VAPQTLQLGN  180
GMVTAVVGQG LGGAMTVAAP TTPVVLNGMG KVEAGDLSSL SPVPYPFDTA LRVRKGPTVE  240
KVVERRQRRM IKNRESAARS RARKQAYIME LEAEVAKLKE QNDELQKKQV EMLKKQKDEV  300
LERINNQLGP KAKKLCLRRT LTGPW*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9651970.0EU965197.1 Zea mays clone 284430 bZIP transcription factor family protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004964902.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
SwissprotQ6ZDF31e-71TRAB1_ORYSJ; bZIP transcription factor TRAB1
SwissprotQ9M7Q51e-71AI5L4_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 4
TrEMBLK3XY810.0K3XY81_SETIT; Uncharacterized protein
STRINGSi006889m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70638147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49720.12e-66abscisic acid responsive element-binding factor 1